Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CI641_027150 | Not Available | Negative | 5422445 - 5422732 | 11035.3 |
| nuclease | CI641_027155 | Not Available | Negative | 5422753 - 5423419 | 24824.6 |
| mobc family plasmid mobilization relaxosome protein | CI641_027160 | Not Available | Negative | 5423409 - 5423732 | 11966.6 |
| rop family plasmid primer rna-binding protein | CI641_027165 | Not Available | Positive | 5423797 - 5423988 | 7170.4 |
| hypothetical protein | CI641_027170 | Not Available | Negative | 5424064 - 5424243 | 6934.27 |
| hypothetical protein | CI641_027180 | Not Available | Negative | 5425120 - 5425923 | 31386.4 |
| hypothetical protein | CI641_027185 | Not Available | Negative | 5425910 - 5426449 | 21100.6 |
| nickel transporter | CI641_027190 | Not Available | Negative | 5426452 - 5426979 | 19938.6 |
| mobilization protein | CI641_027195 | Not Available | Negative | 5427204 - 5427365 | 6284.52 |
| mbed family mobilization/exclusion protein | CI641_027200 | Not Available | Negative | 5427396 - 5427629 | 9414.16 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





