Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein trab | CI641_027100 | Not Available | Negative | 5415255 - 5416682 | 50462.8 |
| type-f conjugative transfer system secretin trak | CI641_027105 | Not Available | Negative | 5416682 - 5417353 | 23511.0 |
| type iv conjugative transfer system protein trae | CI641_027110 | Not Available | Negative | 5417397 - 5417963 | 21225.5 |
| type iv conjugative transfer system protein tral | CI641_027115 | Not Available | Negative | 5417985 - 5418296 | 11904.7 |
| type iv conjugative transfer system pilin traa | CI641_027120 | Not Available | Negative | 5418311 - 5418670 | 12667.2 |
| relaxosome protein tray | CI641_027125 | Not Available | Negative | 5418704 - 5418931 | 9005.61 |
| pas domain-containing protein | CI641_027130 | Not Available | Negative | 5419025 - 5419711 | 26505.8 |
| relaxosome protein tram | CI641_027135 | Not Available | Negative | 5419902 - 5420285 | 14543.4 |
| lytic transglycosylase | CI641_027140 | Not Available | Positive | 5420562 - 5421209 | 24549.9 |
| duf945 domain-containing protein | CI641_027145 | Not Available | Negative | 5421506 - 5422327 | 31605.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





