Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | CI641_027040 | Not Available | Negative | 5404598 - 5405335 | 26999.4 |
| 23s rrna (adenine(2058)-n(6))-methyltransferase erm(42) | CI641_027045 | Not Available | Positive | 5405728 - 5406633 | 35358.5 |
| grpb family protein | CI641_027055 | Not Available | Negative | 5408401 - 5408730 | 12303.6 |
| hypothetical protein | CI641_027060 | Not Available | Positive | 5408675 - 5409247 | 21581.8 |
| is4-like element isvsa5 family transposase | CI641_027065 | Not Available | Positive | 5409187 - 5410395 | 46030.1 |
| hypothetical protein | CI641_027070 | Not Available | Positive | 5410418 - 5410741 | 12649.4 |
| abc-f family atp-binding cassette domain-containing protein | CI641_027075 | Not Available | Positive | 5411310 - 5412932 | 59986.0 |
| is91 family transposase | CI641_027085 | Not Available | Negative | 5413432 - 5414400 | 35658.1 |
| duf2689 domain-containing protein | CI641_027090 | Not Available | Negative | 5414498 - 5414696 | 7169.83 |
| conjugal transfer protein trap | CI641_027095 | Not Available | Negative | 5414693 - 5415265 | 21434.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





