Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnaj | CI641_026825 | Not Available | Positive | 5376237 - 5376596 | 13035.0 |
| hypothetical protein | CI641_026830 | Not Available | Positive | 5376598 - 5376897 | 11590.8 |
| hypothetical protein | CI641_026835 | Not Available | Positive | 5376988 - 5377338 | 13491.2 |
| type ii toxin-antitoxin system hica family toxin | CI641_026840 | Not Available | Positive | 5377643 - 5377891 | 9422.63 |
| type ii toxin-antitoxin system hicb family antitoxin | CI641_026845 | Not Available | Positive | 5377888 - 5378235 | 13114.5 |
| hypothetical protein | CI641_026855 | Not Available | Positive | 5378596 - 5379099 | 19047.3 |
| nickase | CI641_026860 | Not Available | Positive | 5379103 - 5380332 | 47355.7 |
| dna-binding response regulator | CI641_026865 | Not Available | Positive | 5380409 - 5380702 | 10850.1 |
| acetyltransferase | CI641_026870 | Not Available | Positive | 5380699 - 5380914 | 8068.57 |
| lytic transglycosylase domain-containing protein | CI641_026875 | Not Available | Positive | 5381270 - 5381890 | 23205.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





