Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system pilin assembly protein trbc | CI641_026775 | Not Available | Negative | 5369346 - 5369984 | 23558.1 |
| hypothetical protein | CI641_026780 | Not Available | Negative | 5370012 - 5370464 | 17167.5 |
| atp-binding protein | CI641_026785 | Not Available | Negative | 5370494 - 5370955 | 17864.3 |
| duf2726 domain-containing protein | CI641_026790 | Not Available | Negative | 5371248 - 5371775 | 20011.9 |
| hypothetical protein | CI641_026795 | Not Available | Negative | 5371910 - 5372272 | 13481.6 |
| replication initiation protein | CI641_026800 | Not Available | Negative | 5372327 - 5373193 | 33208.9 |
| molecular chaperone dnaj | CI641_026805 | Not Available | Positive | 5374520 - 5375035 | 19719.3 |
| hypothetical protein | CI641_026810 | Not Available | Positive | 5375140 - 5375682 | 20685.9 |
| hypothetical protein | CI641_026815 | Not Available | Positive | 5375679 - 5375930 | 9751.68 |
| xre family transcriptional regulator | CI641_026820 | Not Available | Positive | 5375917 - 5376144 | 8660.46 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





