Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class 1 integron integrase inti1 | CI641_026605 | Not Available | Positive | 5340787 - 5341800 | 38383.4 |
| duf3330 domain-containing protein | CI641_026615 | Not Available | Positive | 5342003 - 5342353 | 12550.7 |
| hamp domain-containing protein | CI641_026630 | Not Available | Positive | 5344088 - 5345485 | 49778.9 |
| hypothetical protein | CI641_026635 | Not Available | Negative | 5345633 - 5345872 | 9056.79 |
| replication protein repa4 | CI641_026640 | Not Available | Positive | 5346082 - 5346213 | 4778.83 |
| replication protein | CI641_026645 | Not Available | Negative | 5346217 - 5346423 | 7660.07 |
| hypothetical protein | CI641_026650 | Not Available | Negative | 5346553 - 5346747 | 7424.08 |
| incfii family plasmid replication initiator repa | CI641_026655 | Not Available | Negative | 5346787 - 5347644 | 32801.7 |
| repa leader peptide tap | CI641_026660 | Not Available | Negative | 5347637 - 5347711 | 2699.38 |
| replication protein repa | CI641_026665 | Not Available | Positive | 5347793 - 5347906 | 4180.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





