Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parb/repb/spo0j family partition protein | CI641_026555 | Not Available | Negative | 5333798 - 5334811 | 37435.7 |
| para family protein | CI641_026560 | Not Available | Negative | 5334811 - 5335569 | 27877.1 |
| transcriptional regulator | CI641_026565 | Not Available | Negative | 5335578 - 5335922 | 13031.5 |
| zeta toxin family protein | CI641_026570 | Not Available | Negative | 5336124 - 5336714 | 22220.1 |
| replication initiator protein | CI641_026575 | Not Available | Positive | 5336844 - 5336943 | 3370.18 |
| recombinase family protein | CI641_026580 | Not Available | Positive | 5337089 - 5337646 | 20604.8 |
| class a broad-spectrum beta-lactamase tem-1 | CI641_026585 | Not Available | Positive | 5337829 - 5338689 | 31517.0 |
| qace family quaternary ammonium compound efflux smr transporter | CI641_026590 | Not Available | Negative | 5338828 - 5339109 | 9769.35 |
| ant(3'')-ia family aminoglycoside nucleotidyltransferase aada1 | CI641_026595 | Not Available | Negative | 5339273 - 5340064 | 29361.9 |
| trimethoprim-resistant dihydrofolate reductase dfra1 | CI641_026600 | Not Available | Negative | 5340157 - 5340630 | 17562.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





