Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transfer signal peptidase traf | CI641_026505 | Not Available | Negative | 5324362 - 5324895 | 19092.5 |
| conjugal transfer protein trag | CI641_026510 | Not Available | Negative | 5324892 - 5326835 | 71749.9 |
| hypothetical protein | CI641_026515 | Not Available | Negative | 5326822 - 5326977 | 5678.85 |
| conjugal transfer protein trai | CI641_026520 | Not Available | Negative | 5326974 - 5329586 | 96716.0 |
| conjugal transfer transcriptional regulator traj | CI641_026525 | Not Available | Negative | 5329636 - 5329995 | 13348.3 |
| dna-processing protein | CI641_026530 | Not Available | Positive | 5330345 - 5330779 | 16216.1 |
| conjugal transfer protein tral | CI641_026535 | Not Available | Positive | 5330779 - 5331564 | 29396.2 |
| conjugal transfer protein tram | CI641_026540 | Not Available | Positive | 5331564 - 5332004 | 16313.9 |
| tran-like protein | CI641_026545 | Not Available | Negative | 5332162 - 5332842 | 25559.0 |
| conjugal transfer protein trao | CI641_026550 | Not Available | Negative | 5332864 - 5333193 | 12143.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





