Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein | CI641_026295 | Not Available | Negative | 5289633 - 5290628 | 35415.3 |
| hypothetical protein | CI641_026300 | Not Available | Negative | 5290632 - 5290889 | 9620.51 |
| hypothetical protein | CI641_026305 | Not Available | Negative | 5290886 - 5291188 | 11311.1 |
| hypothetical protein | CI641_026310 | Not Available | Negative | 5291169 - 5291360 | 7262.65 |
| hypothetical protein | CI641_026315 | Not Available | Positive | 5291416 - 5291604 | 6943.65 |
| is91 family transposase | CI641_026320 | Not Available | Positive | 5291614 - 5292813 | 45524.7 |
| hypothetical protein | CI641_026325 | Not Available | Negative | 5293147 - 5293359 | 7969.55 |
| nfed family protein | CI641_026330 | Not Available | Negative | 5293544 - 5293987 | 16473.2 |
| hypothetical protein | CI641_026335 | Not Available | Negative | 5293990 - 5294244 | 9925.1 |
| spfh/band 7/phb domain protein | CI641_026340 | Not Available | Negative | 5294361 - 5295314 | 34944.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





