Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | CI641_026240 | Not Available | Negative | 5283229 - 5283813 | 21519.2 |
| hypothetical protein | CI641_026245 | Not Available | Negative | 5283834 - 5284232 | 15317.5 |
| pilus assembly protein pilm | CI641_026250 | Not Available | Negative | 5284351 - 5284788 | 16451.9 |
| pilus assembly protein | CI641_026255 | Not Available | Negative | 5284794 - 5286029 | 45580.0 |
| conjugal transfer protein | CI641_026260 | Not Available | Negative | 5286032 - 5286331 | 10501.8 |
| type ii toxin-antitoxin system rele/pare family toxin | CI641_026265 | Not Available | Negative | 5286399 - 5286680 | 10946.4 |
| plasmid stabilization protein | CI641_026270 | Not Available | Negative | 5286670 - 5286921 | 9223.87 |
| hypothetical protein | CI641_026275 | Not Available | Negative | 5287021 - 5287656 | 23048.6 |
| hypothetical protein | CI641_026285 | Not Available | Negative | 5288750 - 5288974 | 8376.01 |
| conjugal transfer protein trbj | CI641_026290 | Not Available | Negative | 5288983 - 5289627 | 24283.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





