Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | CI641_026190 | Not Available | Negative | 5273758 - 5274294 | 20438.1 |
| type iv secretory system conjugative dna transfer family protein | CI641_026195 | Not Available | Negative | 5274341 - 5276299 | 73408.1 |
| p-type dna transfer atpase virb11 | CI641_026200 | Not Available | Negative | 5276315 - 5277370 | 39831.7 |
| trbi/virb10 family protein | CI641_026205 | Not Available | Negative | 5277389 - 5278528 | 41205.2 |
| conjugal transfer protein trah | CI641_026210 | Not Available | Negative | 5278518 - 5279219 | 26698.4 |
| type iv secretion system protein | CI641_026215 | Not Available | Negative | 5279285 - 5280019 | 28186.9 |
| traf protein | CI641_026220 | Not Available | Negative | 5280019 - 5280153 | 4768.87 |
| conjugal transfer protein | CI641_026225 | Not Available | Negative | 5280185 - 5282542 | 88368.5 |
| conjugal transfer protein trad | CI641_026230 | Not Available | Negative | 5282548 - 5282868 | 11912.2 |
| conjugal transfer protein | CI641_026235 | Not Available | Negative | 5282939 - 5283079 | 5173.46 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





