Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shufflon protein c' | CI641_026135 | Not Available | Positive | 5262989 - 5263186 | 7142.49 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | CI641_026145 | Not Available | Negative | 5264531 - 5265817 | 44959.6 |
| prepilin peptidase | CI641_026150 | Not Available | Negative | 5265830 - 5266465 | 23749.0 |
| lytic transglycosylase domain-containing protein | CI641_026155 | Not Available | Negative | 5266469 - 5266951 | 18159.2 |
| hypothetical protein | CI641_026160 | Not Available | Negative | 5267018 - 5267575 | 19811.6 |
| type ii secretion protein f | CI641_026165 | Not Available | Negative | 5267620 - 5268729 | 41845.4 |
| type ii secretion protein e | CI641_026170 | Not Available | Negative | 5268720 - 5270258 | 57253.2 |
| type iv pilus biogenesis protein pilp | CI641_026175 | Not Available | Negative | 5270283 - 5270777 | 17634.2 |
| pilin accessory family protein | CI641_026180 | Not Available | Negative | 5270761 - 5272083 | 49836.3 |
| piln family type ivb pilus formation outer membrane protein | CI641_026185 | Not Available | Negative | 5272122 - 5273765 | 58038.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





