Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoethanolamine--lipid a transferase mcr-1.1 | CI641_026085 | Not Available | Positive | 5252365 - 5253990 | 60127.4 |
| pap2 family protein | CI641_026090 | Not Available | Positive | 5254038 - 5254814 | 28687.4 |
| hypothetical protein | CI641_026095 | Not Available | Negative | 5255232 - 5255423 | 7259.45 |
| hemolysin expression modulator hha | CI641_026100 | Not Available | Negative | 5255581 - 5255787 | 8058.68 |
| dna topoisomerase iii | CI641_026105 | Not Available | Negative | 5255856 - 5258021 | 80077.5 |
| dna topoisomerase iii | CI641_026110 | Not Available | Negative | 5258026 - 5258601 | 21717.9 |
| hypothetical protein | CI641_026115 | Not Available | Negative | 5258771 - 5260447 | 66248.6 |
| hypothetical protein | CI641_026120 | Not Available | Negative | 5260542 - 5261057 | 19505.6 |
| hypothetical protein | CI641_026125 | Not Available | Negative | 5261104 - 5261529 | 16021.5 |
| site-specific integrase | CI641_026130 | Not Available | Negative | 5261769 - 5262893 | 43068.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





