Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CI641_026035 | Not Available | Negative | 5242142 - 5242324 | 7004.41 |
| antitoxin hicb | CI641_026040 | Not Available | Positive | 5242826 - 5243125 | 10794.5 |
| hypothetical protein | CI641_026045 | Not Available | Negative | 5243385 - 5243711 | 12174.5 |
| hypothetical protein | CI641_026050 | Not Available | Negative | 5243713 - 5244153 | 16690.6 |
| hypothetical protein | CI641_026055 | Not Available | Negative | 5244173 - 5244904 | 27739.1 |
| conjugal transfer protein tral | CI641_026060 | Not Available | Negative | 5244882 - 5245634 | 28123.7 |
| zinc transporter | CI641_026065 | Not Available | Negative | 5245652 - 5246053 | 15430.3 |
| mobc family plasmid mobilization relaxosome protein | CI641_026070 | Not Available | Positive | 5246422 - 5246763 | 13148.0 |
| relaxase | CI641_026075 | Not Available | Positive | 5246760 - 5251073 | 164709.0 |
| is30-like element isapl1 family transposase | CI641_026080 | Not Available | Positive | 5251195 - 5252169 | 37701.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





