Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is200/is605 family element transposase accessory protein tnpb | CI641_025980 | Not Available | Positive | 5236829 - 5237221 | 14098.9 |
| hypothetical protein | CI641_025985 | Not Available | Negative | 5237206 - 5237409 | 7215.67 |
| hypothetical protein | CI641_025990 | Not Available | Positive | 5237361 - 5237576 | 7559.21 |
| hypothetical protein | CI641_025995 | Not Available | Positive | 5237725 - 5238054 | 12556.7 |
| hypothetical protein | CI641_026005 | Not Available | Positive | 5239072 - 5239614 | 20682.0 |
| hypothetical protein | CI641_026010 | Not Available | Positive | 5239611 - 5239865 | 9942.99 |
| xre family transcriptional regulator | CI641_026015 | Not Available | Positive | 5239862 - 5240104 | 9136.96 |
| hypothetical protein | CI641_026020 | Not Available | Positive | 5240675 - 5240968 | 11485.6 |
| type ii toxin-antitoxin system hica family toxin | CI641_026025 | Not Available | Positive | 5241462 - 5241710 | 9378.57 |
| type ii toxin-antitoxin system hicb family antitoxin | CI641_026030 | Not Available | Positive | 5241707 - 5242054 | 13207.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





