Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinate/shikimate dehydrogenase | CI641_001150 | Not Available | Positive | 244668 - 245534 | 31243.7 |
| type i 3-dehydroquinate dehydratase | CI641_001155 | Not Available | Positive | 245565 - 246323 | 27551.4 |
| acyl coa:acetate/3-ketoacid coa transferase | CI641_001160 | Not Available | Positive | 246467 - 248062 | 57602.7 |
| acyl-coa dehydrogenase | CI641_001165 | Not Available | Positive | 248076 - 249227 | 43004.6 |
| arac family transcriptional regulator | CI641_001170 | Not Available | Negative | 249270 - 250181 | 34834.2 |
| electron transfer flavoprotein | CI641_001175 | Not Available | Positive | 250497 - 251261 | 27429.9 |
| electron transfer flavoprotein subunit alpha | CI641_001180 | Not Available | Positive | 251281 - 252219 | 33829.7 |
| fad-dependent oxidoreductase | CI641_001185 | Not Available | Positive | 252275 - 253564 | 45983.8 |
| ferredoxin family protein | CI641_001190 | Not Available | Positive | 253561 - 253854 | 10685.7 |
| medium-chain fatty-acid--coa ligase | CI641_001195 | Not Available | Positive | 253857 - 255557 | 62766.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





