Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Rna-directed dna polymerase | CI641_020375 | Not Available | Positive | 4243306 - 4244532 | 46980.4 |
| Alkylated dna repair protein alkb | CI641_020380 | Not Available | Positive | 4244529 - 4245236 | 27239.0 |
| Capsid packaging protein | CI641_020385 | Not Available | Negative | 4245279 - 4246298 | 38688.4 |
| Gpp | CI641_020390 | Not Available | Negative | 4246298 - 4248070 | 66588.2 |
| Capsid-scaffolding protein | CI641_020395 | Not Available | Positive | 4248244 - 4249098 | 31447.2 |
| Major capsid protein | CI641_020400 | Not Available | Positive | 4249157 - 4250230 | 40225.8 |
| Terminase | CI641_020405 | Not Available | Positive | 4250234 - 4250977 | 27437.6 |
| Head completion-stabilization protein | CI641_020410 | Not Available | Positive | 4251077 - 4251586 | 19102.9 |
| Tail completion protein | CI641_020415 | Not Available | Positive | 4251586 - 4251789 | 7066.51 |
| Holin | CI641_020420 | Not Available | Positive | 4251793 - 4252074 | 9818.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





