Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trap | CI641_025645 | Not Available | Positive | 5183825 - 5184415 | 22020.7 |
| duf2689 domain-containing protein | CI641_025650 | Not Available | Positive | 5184369 - 5184719 | 12535.4 |
| conjugal transfer protein trbg | CI641_025655 | Not Available | Positive | 5184716 - 5184967 | 9126.86 |
| type iv conjugative transfer system lipoprotein trav | CI641_025660 | Not Available | Positive | 5184964 - 5185479 | 18467.2 |
| conjugal transfer protein trar | CI641_025665 | Not Available | Positive | 5185614 - 5185835 | 8342.01 |
| hypothetical protein | CI641_025670 | Not Available | Positive | 5185828 - 5186304 | 18229.2 |
| hypothetical protein | CI641_025680 | Not Available | Positive | 5186626 - 5186988 | 13684.4 |
| type iv secretion system protein trac | CI641_025685 | Not Available | Positive | 5187114 - 5189744 | 99389.6 |
| type-f conjugative transfer system protein trbi | CI641_025690 | Not Available | Positive | 5189741 - 5190127 | 14220.1 |
| type-f conjugative transfer system protein traw | CI641_025695 | Not Available | Positive | 5190124 - 5190756 | 23631.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





