Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | CI641_025545 | Not Available | Positive | 5170934 - 5171473 | 19743.4 |
| duf905 domain-containing protein | CI641_025550 | Not Available | Positive | 5171536 - 5171769 | 9089.76 |
| parb/repb/spo0j family partition protein | CI641_025555 | Not Available | Positive | 5171835 - 5173793 | 71530.1 |
| conjugation system sos inhibitor psib | CI641_025560 | Not Available | Positive | 5173848 - 5174282 | 15777.6 |
| plasmid sos inhibition protein a | CI641_025565 | Not Available | Positive | 5174279 - 5174998 | 27743.0 |
| type i toxin-antitoxin system hok family toxin | CI641_025570 | Not Available | Positive | 5175278 - 5175436 | 6082.66 |
| hypothetical protein | CI641_025575 | Not Available | Positive | 5175656 - 5175886 | 7962.73 |
| hypothetical protein | CI641_025580 | Not Available | Positive | 5175937 - 5176125 | 6525.07 |
| single-stranded dna-binding protein | CI641_025585 | Not Available | Positive | 5176127 - 5176333 | 7382.98 |
| hypothetical protein | CI641_025590 | Not Available | Positive | 5176358 - 5176645 | 11035.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





