Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CI641_025495 | Not Available | Positive | 5166566 - 5166757 | 7220.75 |
| hypothetical protein | CI641_025500 | Not Available | Positive | 5167177 - 5167371 | 6760.5 |
| hypothetical protein | CI641_025505 | Not Available | Negative | 5167298 - 5167534 | 9144.2 |
| hypothetical protein | CI641_025510 | Not Available | Positive | 5167795 - 5168025 | 8582.57 |
| duf3560 domain-containing protein | CI641_025515 | Not Available | Positive | 5168077 - 5169438 | 51763.2 |
| class i sam-dependent methyltransferase | CI641_025520 | Not Available | Positive | 5169486 - 5170049 | 21095.8 |
| hypothetical protein | CI641_025525 | Not Available | Positive | 5170049 - 5170291 | 9049.78 |
| hypothetical protein | CI641_025530 | Not Available | Positive | 5170201 - 5170461 | 8607.44 |
| hypothetical protein | CI641_025535 | Not Available | Positive | 5170512 - 5170700 | 6450.93 |
| single-stranded dna-binding protein | CI641_025540 | Not Available | Positive | 5170702 - 5170908 | 7479.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





