Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CI641_025345 | Not Available | Positive | 5146645 - 5148147 | 59411.7 |
| plasmid-partitioning protein sopa | CI641_025355 | Not Available | Positive | 5149300 - 5150466 | 43690.6 |
| parb/repb/spo0j family plasmid partition protein | CI641_025360 | Not Available | Positive | 5150466 - 5151437 | 35388.3 |
| antirestriction protein | CI641_025385 | Not Available | Positive | 5153546 - 5153848 | 11513.6 |
| duf1380 domain-containing protein | CI641_025390 | Not Available | Positive | 5153848 - 5154309 | 17043.3 |
| hypothetical protein | CI641_025395 | Not Available | Positive | 5154309 - 5154491 | 6870.28 |
| transporter | CI641_025405 | Not Available | Positive | 5154647 - 5154766 | 4828.18 |
| hypothetical protein | CI641_025410 | Not Available | Positive | 5155146 - 5156030 | 33695.7 |
| hypothetical protein | CI641_025425 | Not Available | Negative | 5156541 - 5159216 | 99701.4 |
| duf4238 domain-containing protein | CI641_025430 | Not Available | Positive | 5159519 - 5160520 | 38331.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





