Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | CI641_025255 | Not Available | Positive | 5135255 - 5135995 | 28193.5 |
| repb family plasmid replication initiator protein | CI641_025260 | Not Available | Negative | 5136280 - 5137257 | 37276.0 |
| prephenate dehydratase | CI641_025290 | Not Available | Positive | 5139925 - 5140116 | 7362.94 |
| iron/manganese abc transporter substrate-binding protein sita | CI641_025295 | Not Available | Positive | 5140239 - 5141153 | 33452.2 |
| iron/manganese abc transporter atp-binding protein sitb | CI641_025300 | Not Available | Positive | 5141153 - 5141980 | 30104.5 |
| iron/manganese abc transporter permease subunit sitc | CI641_025305 | Not Available | Positive | 5141977 - 5142834 | 30762.6 |
| iron/manganese abc transporter permease subunit sitd | CI641_025310 | Not Available | Positive | 5142831 - 5143688 | 30727.9 |
| hypothetical protein | CI641_025330 | Not Available | Positive | 5144702 - 5144896 | 7377.15 |
| peptidase m14 | CI641_025335 | Not Available | Negative | 5144972 - 5145451 | 18039.8 |
| hypothetical protein | CI641_025340 | Not Available | Positive | 5145569 - 5146018 | 16316.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





