Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fadr family transcriptional regulator | CI641_025190 | Not Available | Negative | 5126025 - 5126681 | 25234.4 |
| c4-dicarboxylate abc transporter | CI641_025195 | Not Available | Positive | 5126847 - 5127374 | 17681.4 |
| isl3 family transposase | CI641_025205 | Not Available | Negative | 5127417 - 5128694 | 49703.1 |
| permease | CI641_025210 | Not Available | Negative | 5128707 - 5129741 | 35923.4 |
| helix-turn-helix transcriptional regulator | CI641_025215 | Not Available | Positive | 5129853 - 5130167 | 11315.7 |
| yaio family outer membrane beta-barrel protein | CI641_025220 | Not Available | Negative | 5130426 - 5131199 | 29175.0 |
| acetyltransferase | CI641_025225 | Not Available | Negative | 5131201 - 5131782 | 20736.2 |
| glycosyltransferase family 2 protein | CI641_025230 | Not Available | Negative | 5131760 - 5132956 | 44815.2 |
| pig-l family deacetylase | CI641_025235 | Not Available | Negative | 5132970 - 5133626 | 24666.8 |
| serine/threonine protein kinase | CI641_025250 | Not Available | Positive | 5134913 - 5135134 | 8465.49 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





