Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CI641_025130 | Not Available | Positive | 5111202 - 5111480 | 10080.2 |
| isoaspartyl peptidase/l-asparaginase | CI641_025135 | Not Available | Negative | 5111819 - 5112850 | 36457.4 |
| is5 family transposase | CI641_025140 | Not Available | Negative | 5113020 - 5113943 | 34911.0 |
| virulence protein | CI641_025155 | Not Available | Positive | 5115615 - 5115842 | 8090.84 |
| c4-dicarboxylate abc transporter | CI641_025160 | Not Available | Negative | 5115895 - 5117256 | 47995.7 |
| peptidase t | CI641_025165 | Not Available | Negative | 5117253 - 5118509 | 45976.5 |
| aspartate ammonia-lyase | CI641_025170 | Not Available | Positive | 5119384 - 5120784 | 51114.6 |
| anaerobic c4-dicarboxylate transporter | CI641_025175 | Not Available | Positive | 5120940 - 5122274 | 47030.0 |
| l-asparaginase 2 | CI641_025180 | Not Available | Positive | 5122762 - 5123808 | 36893.8 |
| two-component system response regulator dcur | CI641_025185 | Not Available | Negative | 5124321 - 5125046 | 27845.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





