Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-galactonate dehydratase 1 | CI641_025060 | Not Available | Negative | 5099046 - 5100194 | 42552.3 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | CI641_025065 | Not Available | Negative | 5100191 - 5100808 | 21443.9 |
| 2-dehydro-3-deoxygalactonokinase | CI641_025070 | Not Available | Negative | 5100792 - 5101670 | 31493.5 |
| fadr family transcriptional regulator | CI641_025075 | Not Available | Negative | 5101667 - 5102356 | 26081.1 |
| chromosome partitioning atpase | CI641_025090 | Not Available | Negative | 5103799 - 5104128 | 12193.9 |
| gntr family transcriptional regulator | CI641_025095 | Not Available | Positive | 5104416 - 5104550 | 4579.51 |
| mhs family mfs transporter | CI641_025105 | Not Available | Positive | 5105803 - 5107197 | 51015.0 |
| laci family transcriptional regulator | CI641_025110 | Not Available | Positive | 5107302 - 5108333 | 37899.2 |
| nucleoside hydrolase | CI641_025115 | Not Available | Positive | 5108308 - 5109327 | 36857.5 |
| mgtc/sapb family protein | CI641_025120 | Not Available | Positive | 5109391 - 5110104 | 25886.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





