Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna distortion polypeptide 3 | CI641_024695 | Not Available | Positive | 5045706 - 5046062 | 13765.8 |
| hypothetical protein | CI641_024700 | Not Available | Negative | 5046059 - 5047036 | 37784.7 |
| copg family transcriptional regulator | CI641_024705 | Not Available | Negative | 5047061 - 5047342 | 10357.4 |
| peptidyl-arginine deiminase | CI641_024710 | Not Available | Negative | 5047440 - 5048102 | 24021.9 |
| hypothetical protein | CI641_024855 | Not Available | Positive | 5068345 - 5068569 | 8677.53 |
| dihydrofolate reductase | CI641_024860 | Not Available | Positive | 5068660 - 5069172 | 19675.7 |
| is91 family transposase | CI641_024870 | Not Available | Positive | 5069664 - 5070632 | 35658.1 |
| alpha/beta hydrolase | CI641_024880 | Not Available | Positive | 5071344 - 5072261 | 34569.4 |
| tetracycline-inactivating monooxygenase tet(x) | CI641_024885 | Not Available | Positive | 5072251 - 5073408 | 43299.6 |
| is91 family transposase | CI641_024890 | Not Available | Positive | 5073747 - 5074073 | 12498.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





