Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| silver-binding protein sile | CI641_024510 | Not Available | Positive | 5014845 - 5015276 | 15299.1 |
| duf305 domain-containing protein | CI641_024515 | Not Available | Positive | 5015420 - 5015770 | 13055.0 |
| sensor domain-containing diguanylate cyclase | CI641_024525 | Not Available | Positive | 5017703 - 5018677 | 36518.4 |
| hypothetical protein | CI641_024535 | Not Available | Positive | 5019245 - 5019595 | 13419.7 |
| hypothetical protein | CI641_024540 | Not Available | Positive | 5019646 - 5020389 | 28289.7 |
| mfs transporter | CI641_024655 | Not Available | Positive | 5041261 - 5041500 | 8750.14 |
| type ii toxin-antitoxin system rele/pare family toxin | CI641_024665 | Not Available | Negative | 5042491 - 5042772 | 11006.5 |
| plasmid stabilization protein | CI641_024670 | Not Available | Negative | 5042762 - 5043013 | 9194.91 |
| hypothetical protein | CI641_024680 | Not Available | Negative | 5044078 - 5044308 | 9123.24 |
| replication initiation protein | CI641_024685 | Not Available | Positive | 5044247 - 5045083 | 32227.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





