Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2933 domain-containing protein | CI641_024460 | Not Available | Negative | 5002588 - 5002785 | 7269.77 |
| ag(+)-translocating p-type atpase silp | CI641_024465 | Not Available | Negative | 5002826 - 5005303 | 88301.5 |
| hypothetical protein | CI641_024470 | Not Available | Negative | 5005400 - 5005840 | 15490.0 |
| cu(+)/ag(+) efflux rnd transporter permease subunit sila | CI641_024475 | Not Available | Negative | 5005927 - 5009073 | 114804.0 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit silb | CI641_024480 | Not Available | Negative | 5009084 - 5010376 | 47777.5 |
| copper abc transporter substrate-binding protein | CI641_024485 | Not Available | Negative | 5010490 - 5010843 | 12636.2 |
| cu(+)/ag(+) efflux rnd transporter outer membrane channel silc | CI641_024490 | Not Available | Negative | 5010871 - 5012256 | 51116.7 |
| outer-membrane efflux lipo domain protein | CI641_024495 | Not Available | Negative | 5012319 - 5012444 | 4794.94 |
| copper/silver response regulator transcription factor silr | CI641_024500 | Not Available | Positive | 5012446 - 5013126 | 25226.8 |
| copper/silver sensor histidine kinase sils | CI641_024505 | Not Available | Positive | 5013119 - 5014594 | 55846.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





