Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CI641_023750 | Not Available | Positive | 4885465 - 4885761 | 11364.8 |
| hypothetical protein | CI641_023755 | Not Available | Positive | 4885964 - 4886281 | 12134.2 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | CI641_023760 | Not Available | Negative | 4886278 - 4887702 | 49532.7 |
| prepilin peptidase | CI641_023765 | Not Available | Negative | 4887702 - 4888358 | 24602.8 |
| lytic transglycosylase domain-containing protein | CI641_023770 | Not Available | Negative | 4888343 - 4888903 | 20760.4 |
| pilus assembly protein pilx | CI641_023775 | Not Available | Negative | 4888913 - 4889527 | 21214.2 |
| pilus assembly protein pilr | CI641_023780 | Not Available | Negative | 4889545 - 4890642 | 41419.4 |
| atp-binding protein | CI641_023785 | Not Available | Negative | 4890655 - 4892208 | 58286.3 |
| type iv pilus biogenesis protein pilp | CI641_023790 | Not Available | Negative | 4892219 - 4892671 | 16019.2 |
| pilus assembly protein pilo | CI641_023795 | Not Available | Negative | 4892658 - 4893953 | 48105.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





