Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein | CI641_023700 | Not Available | Negative | 4878896 - 4879714 | 30577.6 |
| hypothetical protein | CI641_023705 | Not Available | Negative | 4879711 - 4880169 | 16979.3 |
| histidine phosphatase family protein | CI641_023710 | Not Available | Negative | 4880564 - 4881148 | 21989.4 |
| type ix secretion system membrane protein porp/sprf | CI641_023715 | Not Available | Negative | 4881208 - 4882410 | 43266.2 |
| conjugal transfer protein trae | CI641_023720 | Not Available | Negative | 4882495 - 4883319 | 30848.3 |
| integrase | CI641_023725 | Not Available | Negative | 4883470 - 4884624 | 44256.6 |
| shufflon protein c' | CI641_023730 | Not Available | Positive | 4884752 - 4884907 | 5595.65 |
| shufflon protein c | CI641_023735 | Not Available | Negative | 4884904 - 4885206 | 11228.1 |
| pilus assembly protein pilv | CI641_023740 | Not Available | Negative | 4885107 - 4885292 | 7012.4 |
| shufflon protein d' | CI641_023745 | Not Available | Positive | 4885259 - 4885477 | 7988.18 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





