Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| y-family dna polymerase | CI641_023365 | Not Available | Negative | 4825589 - 4826860 | 47567.4 |
| translesion error-prone dna polymerase v autoproteolytic subunit | CI641_023370 | Not Available | Negative | 4826860 - 4827297 | 16220.1 |
| protein impc | CI641_023375 | Not Available | Negative | 4827294 - 4827542 | 9502.3 |
| hypothetical protein | CI641_023380 | Not Available | Positive | 4827653 - 4827922 | 9544.68 |
| duf1281 domain-containing protein | CI641_023385 | Not Available | Positive | 4827960 - 4828862 | 33906.7 |
| dna methylase | CI641_023395 | Not Available | Positive | 4829247 - 4829930 | 25537.6 |
| hypothetical protein | CI641_023400 | Not Available | Positive | 4829931 - 4830152 | 8577.28 |
| duf1380 domain-containing protein | CI641_023405 | Not Available | Positive | 4830166 - 4830600 | 16182.3 |
| antirestriction protein | CI641_023420 | Not Available | Positive | 4831956 - 4832258 | 11550.7 |
| duf1380 domain-containing protein | CI641_023425 | Not Available | Positive | 4832305 - 4832727 | 15638.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





