Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CI641_023315 | Not Available | Negative | 4819392 - 4819727 | 12926.4 |
| hypothetical protein | CI641_023320 | Not Available | Negative | 4819907 - 4820488 | 21834.3 |
| hypothetical protein | CI641_023325 | Not Available | Positive | 4820640 - 4820840 | 7058.39 |
| hypothetical protein | CI641_023330 | Not Available | Positive | 4821058 - 4821408 | 13411.6 |
| hypothetical protein | CI641_023335 | Not Available | Positive | 4821478 - 4822086 | 23345.5 |
| phage integrase family protein | CI641_023340 | Not Available | Positive | 4822154 - 4822936 | 28835.2 |
| copg family transcriptional regulator | CI641_023345 | Not Available | Negative | 4823074 - 4823349 | 10060.2 |
| chromosome partitioning protein para | CI641_023350 | Not Available | Negative | 4823343 - 4823987 | 23546.2 |
| plasmid segregation protein parm | CI641_023355 | Not Available | Positive | 4824216 - 4825187 | 35688.6 |
| plasmid stability protein | CI641_023360 | Not Available | Positive | 4825192 - 4825584 | 14632.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





