Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | CI641_023100 | Not Available | Negative | 4789075 - 4790631 | 58457.3 |
| hypothetical protein | CI641_023105 | Not Available | Negative | 4790896 - 4791486 | 21546.9 |
| hypothetical protein | CI641_023110 | Not Available | Negative | 4791486 - 4791743 | 9987.85 |
| nucleotide-binding containing tir-like domain protein | CI641_023115 | Not Available | Positive | 4792072 - 4793175 | 40726.9 |
| hypothetical protein | CI641_023285 | Not Available | Negative | 4816204 - 4816401 | 7223.95 |
| korc | CI641_023290 | Not Available | Positive | 4816340 - 4816630 | 10755.0 |
| hypothetical protein | CI641_023295 | Not Available | Negative | 4816627 - 4816824 | 8041.11 |
| hypothetical protein | CI641_023300 | Not Available | Positive | 4817149 - 4818282 | 43284.1 |
| korc | CI641_023305 | Not Available | Positive | 4818302 - 4818586 | 10584.9 |
| hypothetical protein | CI641_023310 | Not Available | Negative | 4818757 - 4819404 | 24280.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





