Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | CI641_023035 | Not Available | Negative | 4776110 - 4778212 | 77331.0 |
| ynce family protein | CI641_023040 | Not Available | Positive | 4778454 - 4779515 | 38648.1 |
| l-asparagine permease | CI641_023045 | Not Available | Negative | 4779630 - 4781129 | 54236.2 |
| glutathione s-transferase | CI641_023050 | Not Available | Positive | 4781342 - 4781461 | 4478.46 |
| hypothetical protein | CI641_023060 | Not Available | Positive | 4782594 - 4782956 | 13733.8 |
| type vi secretion system tip protein vgrg | CI641_023065 | Not Available | Positive | 4783178 - 4785175 | 74161.4 |
| replication initiation protein | CI641_023070 | Not Available | Positive | 4785271 - 4786302 | 40314.6 |
| replication protein repa4 | CI641_023085 | Not Available | Negative | 4786870 - 4787001 | 4823.92 |
| hypothetical protein | CI641_023090 | Not Available | Positive | 4787212 - 4788204 | 38052.8 |
| proq/fino family protein | CI641_023095 | Not Available | Negative | 4788263 - 4788880 | 23198.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





