Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is200/is605 family element transposase accessory protein tnpb | CI641_022930 | Not Available | Positive | 4757502 - 4758710 | 45726.9 |
| bene family transporter ydco | CI641_022935 | Not Available | Negative | 4758750 - 4759964 | 42117.8 |
| helix-turn-helix domain-containing protein | CI641_022940 | Not Available | Positive | 4760017 - 4760553 | 19732.4 |
| 23s rrna 5-hydroxycytidine c2501 synthase | CI641_022945 | Not Available | Positive | 4760626 - 4762587 | 72867.2 |
| duf2554 family protein | CI641_022950 | Not Available | Negative | 4762679 - 4762909 | 8709.32 |
| type ii toxin-antitoxin system antitoxin hicb | CI641_022960 | Not Available | Positive | 4763331 - 4763747 | 15247.5 |
| plp-dependent aminotransferase family protein | CI641_022965 | Not Available | Positive | 4763826 - 4765232 | 52754.7 |
| abc transporter substrate-binding protein | CI641_022970 | Not Available | Positive | 4765477 - 4766622 | 42311.4 |
| abc transporter atp-binding protein | CI641_022975 | Not Available | Positive | 4766640 - 4767653 | 37042.9 |
| abc transporter permease | CI641_022980 | Not Available | Positive | 4767654 - 4768595 | 34367.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





