Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | CI641_022825 | Not Available | Positive | 4732989 - 4734746 | 65388.3 |
| phosphatase pap2/dual specificity phosphatase family protein | CI641_022830 | Not Available | Positive | 4734736 - 4736052 | 50546.6 |
| fmn-dependent nadh-azoreductase | CI641_022835 | Not Available | Negative | 4736103 - 4736708 | 21642.9 |
| atp-dependent rna helicase hrpa | CI641_022840 | Not Available | Positive | 4736909 - 4740811 | 148970.0 |
| ydcf family protein | CI641_022845 | Not Available | Positive | 4741083 - 4741883 | 29666.3 |
| aldehyde dehydrogenase | CI641_022850 | Not Available | Positive | 4742080 - 4743519 | 52227.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | CI641_022855 | Not Available | Negative | 4743561 - 4744562 | 35750.7 |
| cytochrome b561 | CI641_022860 | Not Available | Positive | 4744751 - 4745281 | 20315.7 |
| hypothetical protein | CI641_022865 | Not Available | Positive | 4745526 - 4745699 | 5860.19 |
| type i toxin-antitoxin system toxin hokb | CI641_022870 | Not Available | Negative | 4745771 - 4745920 | 5626.16 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





