Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase paac | CI641_022775 | Not Available | Positive | 4721833 - 4723260 | 51708.5 |
| hydroxyphenylacetyl-coa thioesterase paai | CI641_022780 | Not Available | Positive | 4723250 - 4723672 | 14851.6 |
| 3-oxoadipyl-coa thiolase | CI641_022785 | Not Available | Positive | 4723672 - 4724877 | 42279.2 |
| phenylacetate--coa ligase | CI641_022790 | Not Available | Positive | 4724904 - 4726217 | 48969.8 |
| phenylacetic acid degradation operon negative regulatory protein paax | CI641_022795 | Not Available | Positive | 4726318 - 4727268 | 35268.7 |
| phenylacetic acid degradation protein paay | CI641_022800 | Not Available | Positive | 4727250 - 4727840 | 21383.9 |
| pyridoxine 4-dehydrogenase | CI641_022805 | Not Available | Positive | 4728071 - 4728931 | 30721.8 |
| duf2773 domain-containing bactofilin | CI641_022810 | Not Available | Positive | 4728995 - 4731301 | 86667.2 |
| cdp-alcohol phosphatidyltransferase family protein | CI641_022815 | Not Available | Positive | 4731472 - 4732077 | 22628.5 |
| phosphatidate cytidylyltransferase | CI641_022820 | Not Available | Positive | 4732077 - 4732973 | 33305.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





