Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent phenylacetaldehyde dehydrogenase | CI641_022725 | Not Available | Positive | 4710298 - 4711797 | 53702.1 |
| primary-amine oxidase | CI641_022730 | Not Available | Negative | 4711855 - 4714128 | 84356.1 |
| phenylacetic acid degradation bifunctional protein paaz | CI641_022735 | Not Available | Negative | 4714376 - 4716421 | 72949.8 |
| 1,2-phenylacetyl-coa epoxidase subunit a | CI641_022740 | Not Available | Positive | 4716706 - 4717635 | 35461.2 |
| 1,2-phenylacetyl-coa epoxidase subunit b | CI641_022745 | Not Available | Positive | 4717647 - 4717934 | 10942.8 |
| phenylacetate-coa oxygenase subunit paac | CI641_022750 | Not Available | Positive | 4717943 - 4718689 | 27880.0 |
| phenylacetate degradation protein paad | CI641_022755 | Not Available | Positive | 4718704 - 4719201 | 18405.2 |
| phenylacetate-coa oxygenase/reductase subunit paak | CI641_022760 | Not Available | Positive | 4719209 - 4720279 | 39312.3 |
| 2,3-dehydroadipyl-coa hydratase | CI641_022765 | Not Available | Positive | 4720276 - 4721043 | 27166.8 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | CI641_022770 | Not Available | Positive | 4721043 - 4721831 | 28438.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





