Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ala-d/l-glu epimerase | CI641_022570 | Not Available | Positive | 4675972 - 4676937 | 34645.0 |
| murein tripeptide amidase mpaa | CI641_022575 | Not Available | Negative | 4676912 - 4677640 | 26576.4 |
| hypothetical protein | CI641_022585 | Not Available | Negative | 4677910 - 4677975 | 2420.94 |
| alpha/beta hydrolase | CI641_022590 | Not Available | Negative | 4677975 - 4678895 | 33680.4 |
| lysr family transcriptional regulator | CI641_022595 | Not Available | Positive | 4679033 - 4679932 | 33479.8 |
| peptide abc transporter substrate-binding protein | CI641_022600 | Not Available | Positive | 4680269 - 4681882 | 59903.3 |
| low conductance mechanosensitive channel ynai | CI641_022605 | Not Available | Negative | 4681933 - 4682964 | 38756.8 |
| duf2534 family protein | CI641_022610 | Not Available | Positive | 4683208 - 4683465 | 9339.82 |
| universal stress protein uspe | CI641_022615 | Not Available | Negative | 4683515 - 4684465 | 35708.9 |
| fumarate/nitrate reduction transcriptional regulator fnr | CI641_022620 | Not Available | Negative | 4684617 - 4685369 | 27968.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





