Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | CI641_022520 | Not Available | Positive | 4663874 - 4664929 | 38658.3 |
| kojibiose phosphorylase | CI641_022525 | Not Available | Positive | 4664926 - 4667193 | 84876.2 |
| beta-phosphoglucomutase | CI641_022530 | Not Available | Positive | 4667190 - 4667849 | 23552.3 |
| abc transporter atp-binding protein | CI641_022535 | Not Available | Positive | 4667863 - 4668945 | 40060.9 |
| monomeric porin ompg | CI641_022540 | Not Available | Positive | 4668990 - 4669895 | 34915.0 |
| laci family transcriptional regulator | CI641_022545 | Not Available | Negative | 4670006 - 4671004 | 36151.2 |
| ycjx family protein | CI641_022550 | Not Available | Positive | 4671159 - 4672556 | 52637.6 |
| tigr01620 family protein | CI641_022555 | Not Available | Positive | 4672553 - 4673614 | 39363.5 |
| tyrr family transcriptional regulator | CI641_022560 | Not Available | Positive | 4673762 - 4675303 | 57659.5 |
| thiol peroxidase | CI641_022565 | Not Available | Negative | 4675347 - 4675853 | 17836.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





