Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| envelope stress response membrane protein pspb | CI641_022470 | Not Available | Positive | 4655844 - 4656068 | 8763.59 |
| envelope stress response membrane protein pspc | CI641_022475 | Not Available | Positive | 4656068 - 4656427 | 13517.7 |
| phage shock protein pspd | CI641_022480 | Not Available | Positive | 4656436 - 4656657 | 8042.22 |
| thiosulfate sulfurtransferase pspe | CI641_022485 | Not Available | Positive | 4656732 - 4657046 | 11476.0 |
| sugar phosphorylase | CI641_022490 | Not Available | Positive | 4657259 - 4658938 | 64185.3 |
| carbohydrate abc transporter substrate-binding protein | CI641_022495 | Not Available | Positive | 4658952 - 4660244 | 46747.0 |
| sugar abc transporter permease | CI641_022500 | Not Available | Positive | 4660265 - 4661146 | 33227.3 |
| carbohydrate abc transporter permease | CI641_022505 | Not Available | Positive | 4661133 - 4661975 | 31252.2 |
| zinc-binding alcohol dehydrogenase | CI641_022510 | Not Available | Positive | 4662006 - 4663058 | 38267.7 |
| sugar phosphate isomerase/epimerase | CI641_022515 | Not Available | Positive | 4663076 - 4663864 | 29814.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





