Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase subunit alpha | CI641_022220 | Not Available | Negative | 4605621 - 4606427 | 28739.8 |
| tryptophan synthase subunit beta | CI641_022225 | Not Available | Negative | 4606427 - 4607620 | 42985.6 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | CI641_022230 | Not Available | Negative | 4607632 - 4608990 | 49345.9 |
| bifunctional anthranilate synthase glutamate amidotransferase component trpg/anthranilate phosphoribosyltransferase trpd | CI641_022235 | Not Available | Negative | 4608994 - 4610589 | 56873.4 |
| anthranilate synthase component i | CI641_022240 | Not Available | Negative | 4610589 - 4612151 | 57580.9 |
| trp operon leader peptide | CI641_022245 | Not Available | Negative | 4612243 - 4612287 | 1723.19 |
| 5'-3' exoribonuclease | CI641_022250 | Not Available | Positive | 4612425 - 4613306 | 32581.8 |
| threonylcarbamoyl-amp synthase | CI641_022255 | Not Available | Positive | 4613303 - 4613923 | 23213.2 |
| 23s rrna pseudouridine(2605) synthase rlub | CI641_022260 | Not Available | Positive | 4614024 - 4614896 | 32599.3 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | CI641_022265 | Not Available | Negative | 4614936 - 4615526 | 22005.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





