Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voltage-gated potassium channel protein | CI641_022165 | Not Available | Negative | 4598222 - 4599475 | 46110.3 |
| ycii family protein | CI641_022170 | Not Available | Negative | 4599774 - 4600070 | 10602.6 |
| tonb system transport protein tonb | CI641_022175 | Not Available | Positive | 4600294 - 4601013 | 26093.7 |
| acyl-coa thioester hydrolase ycia | CI641_022180 | Not Available | Negative | 4601053 - 4601451 | 14231.4 |
| septation protein a | CI641_022185 | Not Available | Negative | 4601556 - 4602095 | 20791.3 |
| upf0259 family protein | CI641_022190 | Not Available | Negative | 4602125 - 4602868 | 26434.6 |
| outer membrane protein ompw | CI641_022200 | Not Available | Positive | 4603225 - 4603863 | 22929.1 |
| ferritin-like domain-containing protein | CI641_022205 | Not Available | Negative | 4603923 - 4604429 | 18997.6 |
| ferritin-like domain-containing protein | CI641_022210 | Not Available | Negative | 4604475 - 4604975 | 18598.2 |
| hypothetical protein | CI641_022215 | Not Available | Negative | 4605061 - 4605240 | 6002.69 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





