Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | CI641_022115 | Not Available | Negative | 4585851 - 4588526 | 96132.5 |
| naat family transporter yche | CI641_022120 | Not Available | Positive | 4589003 - 4589650 | 23522.7 |
| oligopeptide abc transporter substrate-binding protein oppa | CI641_022125 | Not Available | Positive | 4590388 - 4592019 | 60979.1 |
| oligopeptide abc transporter permease oppb | CI641_022130 | Not Available | Positive | 4592105 - 4593025 | 33445.3 |
| oligopeptide abc transporter permease oppc | CI641_022135 | Not Available | Positive | 4593040 - 4593948 | 33023.9 |
| murein tripeptide/oligopeptide abc transporter atp binding protein oppd | CI641_022140 | Not Available | Positive | 4593960 - 4594973 | 37148.7 |
| murein tripeptide/oligopeptide abc transporter atp binding protein oppf | CI641_022145 | Not Available | Positive | 4594970 - 4595974 | 37183.8 |
| duf440 family protein | CI641_022150 | Not Available | Negative | 4596027 - 4596356 | 12687.7 |
| cardiolipin synthase | CI641_022155 | Not Available | Negative | 4596391 - 4597851 | 54825.6 |
| yciy family protein | CI641_022160 | Not Available | Positive | 4597994 - 4598167 | 7102.81 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





