Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate reductase molybdenum cofactor assembly chaperone | CI641_022060 | Not Available | Positive | 4577194 - 4577904 | 26444.3 |
| respiratory nitrate reductase subunit gamma | CI641_022065 | Not Available | Positive | 4577904 - 4578581 | 25484.9 |
| Trna-tyr | Not Available | Not Available | Positive | 4578943 - 4579027 | Not Available |
| formyltetrahydrofolate deformylase | CI641_022080 | Not Available | Negative | 4579187 - 4580029 | 31938.6 |
| ychj family protein | CI641_022085 | Not Available | Negative | 4580079 - 4580537 | 16973.2 |
| patatin-like phospholipase rssa | CI641_022090 | Not Available | Positive | 4580650 - 4581555 | 33041.0 |
| two-component system response regulator rssb | CI641_022095 | Not Available | Positive | 4581647 - 4582660 | 37304.5 |
| utp--glucose-1-phosphate uridylyltransferase galu | CI641_022100 | Not Available | Positive | 4582862 - 4583770 | 32944.2 |
| dna-binding transcriptional regulator h-ns | CI641_022105 | Not Available | Negative | 4583914 - 4584327 | 15540.5 |
| thymidine kinase | CI641_022110 | Not Available | Positive | 4584932 - 4585549 | 23400.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





