Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein localization protein lolb | CI641_021945 | Not Available | Negative | 4555053 - 4555676 | 23552.1 |
| glutamyl-trna reductase | CI641_021950 | Not Available | Positive | 4555890 - 4557146 | 46332.5 |
| peptide chain release factor 1 | CI641_021955 | Not Available | Positive | 4557188 - 4558270 | 40519.6 |
| peptide chain release factor n(5)-glutamine methyltransferase | CI641_021960 | Not Available | Positive | 4558270 - 4559103 | 31028.8 |
| sirb family protein | CI641_021965 | Not Available | Positive | 4559100 - 4559492 | 14625.7 |
| tetratricopeptide repeat-containing protein | CI641_021970 | Not Available | Positive | 4559496 - 4560305 | 30843.1 |
| 3-deoxy-8-phosphooctulonate synthase | CI641_021975 | Not Available | Positive | 4560341 - 4561195 | 30834.5 |
| small toxic polypeptide ldra/ldrc | CI641_021980 | Not Available | Negative | 4561344 - 4561451 | 3984.01 |
| small toxic polypeptide ldra/ldrc | CI641_021990 | Not Available | Negative | 4561879 - 4561986 | 3984.05 |
| small toxic polypeptide ldra/ldrc | CI641_022000 | Not Available | Negative | 4562415 - 4562522 | 4001.97 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





