Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muramoyltetrapeptide carboxypeptidase | CI641_021845 | Not Available | Negative | 4531803 - 4532717 | 33561.5 |
| membrane-bound lytic murein transglycosylase emta | CI641_021850 | Not Available | Positive | 4532817 - 4533428 | 22227.8 |
| flagellar brake protein | CI641_021855 | Not Available | Negative | 4533430 - 4534164 | 27957.9 |
| glsb/yeaq/ymge family stress response membrane protein | CI641_021860 | Not Available | Positive | 4534365 - 4534619 | 8717.3 |
| is66 family insertion sequence hypothetical protein | CI641_021865 | Not Available | Positive | 4534955 - 4535380 | 15906.0 |
| is66 family insertion sequence element accessory protein tnpb | CI641_021870 | Not Available | Positive | 4535377 - 4535727 | 13161.0 |
| is66-like element isec23 family transposase | CI641_021875 | Not Available | Positive | 4535758 - 4537371 | 61288.2 |
| hypothetical protein | CI641_021880 | Not Available | Positive | 4537409 - 4537777 | 14226.9 |
| alpha,alpha-trehalase | CI641_021885 | Not Available | Negative | 4537856 - 4539553 | 63624.0 |
| dihydroxyacetone kinase subunit dham | CI641_021890 | Not Available | Negative | 4539873 - 4541291 | 51532.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





