Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine zipper 2tm domain-containing protein | CI641_021535 | Not Available | Positive | 4473613 - 4474152 | 18921.6 |
| tetr family copper-responsive transcriptional repressor comr | CI641_021540 | Not Available | Negative | 4474214 - 4474846 | 23366.9 |
| multiple stress resistance protein bhsa | CI641_021545 | Not Available | Positive | 4475087 - 4475344 | 8842.58 |
| l,d-transpeptidase ldtc | CI641_021550 | Not Available | Negative | 4475427 - 4476386 | 34476.7 |
| transcription-repair coupling factor | CI641_021555 | Not Available | Negative | 4476533 - 4479979 | 129997.0 |
| acyltransferase family protein | CI641_021560 | Not Available | Negative | 4480107 - 4481180 | 40752.8 |
| lipoprotein-releasing abc transporter permease subunit lolc | CI641_021565 | Not Available | Positive | 4481442 - 4482641 | 43266.5 |
| lipoprotein-releasing abc transporter atp-binding protein lold | CI641_021570 | Not Available | Positive | 4482634 - 4483335 | 25439.9 |
| lipoprotein-releasing abc transporter permease subunit lole | CI641_021575 | Not Available | Positive | 4483335 - 4484579 | 45345.0 |
| n-acetylglucosamine kinase | CI641_021580 | Not Available | Positive | 4484608 - 4485519 | 33072.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





