Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide/tripeptide permease dtpa | CI641_000850 | Not Available | Positive | 183661 - 185163 | 54008.4 |
| glutathione transferase gsta | CI641_000855 | Not Available | Positive | 185269 - 185874 | 22897.7 |
| pyridoxal kinase pdxy | CI641_000860 | Not Available | Negative | 185918 - 186778 | 31192.8 |
| tyrosine--trna ligase | CI641_000865 | Not Available | Negative | 186840 - 188114 | 47559.6 |
| pyridoxamine 5'-phosphate oxidase | CI641_000870 | Not Available | Negative | 188243 - 188899 | 25560.6 |
| c-type lysozyme inhibitor | CI641_000875 | Not Available | Negative | 188958 - 189287 | 12495.2 |
| anhydro-n-acetylmuramic acid kinase | CI641_000880 | Not Available | Negative | 189385 - 190494 | 39526.7 |
| outer membrane lipoprotein slyb | CI641_000885 | Not Available | Positive | 190768 - 191235 | 15602.7 |
| transcriptional regulator slya | CI641_000890 | Not Available | Negative | 191282 - 191716 | 16354.0 |
| duf1656 domain-containing protein | CI641_000895 | Not Available | Positive | 191917 - 192153 | 8891.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





