Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-methyl-l-tryptophan oxidase | CI641_021285 | Not Available | Negative | 4425505 - 4426623 | 40916.2 |
| biofilm formation regulator bsss | CI641_021290 | Not Available | Negative | 4426738 - 4426992 | 9633.29 |
| dna damage-inducible protein i | CI641_021295 | Not Available | Negative | 4427282 - 4427527 | 8979.46 |
| dihydroorotase | CI641_021300 | Not Available | Negative | 4427601 - 4428647 | 38828.6 |
| lipoprotein | CI641_021305 | Not Available | Negative | 4428753 - 4429313 | 20501.0 |
| glutaredoxin 2 | CI641_021310 | Not Available | Negative | 4429447 - 4430094 | 24351.6 |
| multidrug efflux mfs transporter mdth | CI641_021315 | Not Available | Negative | 4430158 - 4431366 | 44322.0 |
| 30s ribosomal protein s5 alanine n-acetyltransferase | CI641_021320 | Not Available | Positive | 4431602 - 4432186 | 22689.1 |
| duf480 domain-containing protein | CI641_021325 | Not Available | Positive | 4432197 - 4432844 | 24205.9 |
| gfo/idh/moca family oxidoreductase | CI641_021330 | Not Available | Positive | 4432846 - 4433769 | 33683.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





